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  5. Glyma.13G336600

Glyma.13G336600


Description : expansin A4


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G336600
Cluster HCCA clusters: Cluster_452

Target Alias Description ECC score Gene Family Method Actions
At1g62980 No alias Expansin-A18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ07] 0.04 Orthogroups_2024-Update
Bradi2g22290 No alias expansin A1 0.06 Orthogroups_2024-Update
Brara.K01453.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Kfl00386_0010 kfl00386_0010_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os02g16839 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g26350.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.016G097500 No alias expansin A4 0.02 Orthogroups_2024-Update
Potri.017G140000 No alias expansin A13 0.02 Orthogroups_2024-Update
Pp1s191_27V6 No alias alpha expansin xpa5 0.03 Orthogroups_2024-Update
Sopen09g010480 No alias Pollen allergen 0.02 Orthogroups_2024-Update
Sopen10g034230 No alias Pollen allergen 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 66 152
IPR007117 Expansin_CBD 164 241
No external refs found!