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  5. Glyma.13G347100

Glyma.13G347100


Description : Pyridoxal-5\'-phosphate-dependent enzyme family protein


Gene families : OG_42_0002844 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002844_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G347100
Cluster HCCA clusters: Cluster_424

Target Alias Description ECC score Gene Family Method Actions
A4A49_21487 No alias threonine synthase, chloroplastic 0.03 Orthogroups_2024-Update
Bradi2g17620 No alias Pyridoxal-5\'-phosphate-dependent enzyme family protein 0.03 Orthogroups_2024-Update
Potri.001G199100 No alias Pyridoxal-5\'-phosphate-dependent enzyme family protein 0.03 Orthogroups_2024-Update
Seita.3G159300.1 No alias threonine synthase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001926 PLP-dep 163 469
No external refs found!