Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.13G357000 | |
Cluster | HCCA clusters: Cluster_479 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g03540 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | Orthogroups_2024-Update | |
At2g34400 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | Orthogroups_2024-Update | |
At4g35130 | No alias | Pentatricopeptide repeat-containing protein At4g35130,... | 0.03 | Orthogroups_2024-Update | |
Bradi2g24060 | No alias | mitochondrial editing factor 21 | 0.03 | Orthogroups_2024-Update | |
Glyma.05G079500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.05G228000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G291800 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
Glyma.10G190600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G073540.14 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G092840.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os06g02200 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os06g12510 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os07g39910 | No alias | pentatricopeptide repeat domain containing protein,... | 0.02 | Orthogroups_2024-Update | |
PSME_00025365-RA | No alias | (at3g49170 : 602.0) embryo defective 2261 (EMB2261);... | 0.03 | Orthogroups_2024-Update | |
PSME_00046266-RA | No alias | (at1g11290 : 679.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
Pp1s169_110V6 | No alias | T12J13.14; pentatricopeptide (PPR) repeat-containing... | 0.02 | Orthogroups_2024-Update | |
Sobic.003G356100.1 | No alias | RNA editing factor *(CRR2) | 0.02 | Orthogroups_2024-Update | |
Sopen01g032600 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
BP | GO:0008150 | biological_process | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
No external refs found! |