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  5. Glyma.14G003000

Glyma.14G003000


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0009851 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.14G003000
Cluster HCCA clusters: Cluster_512

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g51350 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
Seita.7G226000.1 No alias RNA editing factor *(AEF1) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 714 737
IPR002885 Pentatricopeptide_repeat 58 84
IPR002885 Pentatricopeptide_repeat 467 490
IPR002885 Pentatricopeptide_repeat 263 286
IPR002885 Pentatricopeptide_repeat 362 407
IPR002885 Pentatricopeptide_repeat 565 611
No external refs found!