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  5. Glyma.14G003400

Glyma.14G003400


Description : photosystem I light harvesting complex gene 3


Gene families : OG_42_0005254 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.14G003400
Cluster HCCA clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
160411 No alias photosystem I light harvesting complex gene 3 0.04 Orthogroups_2024-Update
A4A49_09113 No alias chlorophyll a-b binding protein 8, chloroplastic 0.06 Orthogroups_2024-Update
A4A49_28400 No alias chlorophyll a-b binding protein 8, chloroplastic 0.07 Orthogroups_2024-Update
At1g61520 No alias Chlorophyll a-b binding protein, chloroplastic... 0.08 Orthogroups_2024-Update
Bradi3g07190 No alias photosystem I light harvesting complex gene 3 0.03 Orthogroups_2024-Update
Brara.A02541.1 No alias component *(LHCa3) of LHC-I complex 0.1 Orthogroups_2024-Update
Brara.I01499.1 No alias component *(LHCa3) of LHC-I complex 0.07 Orthogroups_2024-Update
Cre11.g467573 No alias photosystem I light harvesting complex gene 3 0.06 Orthogroups_2024-Update
HORVU6Hr1G033160.11 No alias component *(LHCa3) of LHC-I complex 0.05 Orthogroups_2024-Update
Kfl00560_0090 kfl00560_0090_v1.1 (at1g61520 : 268.0) PSI type III chlorophyll a/b-binding... 0.06 Orthogroups_2024-Update
LOC_Os02g10390 No alias chlorophyll A-B binding protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_815900g0010 No alias (at1g61520 : 372.0) PSI type III chlorophyll a/b-binding... 0.03 Orthogroups_2024-Update
Mp4g00930.1 No alias component LHCa3 of LHC-I complex 0.05 Orthogroups_2024-Update
PSME_00027596-RA No alias (at1g61520 : 359.0) PSI type III chlorophyll a/b-binding... 0.03 Orthogroups_2024-Update
Potri.014G172400 No alias photosystem I light harvesting complex gene 3 0.03 Orthogroups_2024-Update
Pp1s197_123V6 No alias type iii chlorophyll a b-binding protein 0.07 Orthogroups_2024-Update
Pp1s214_86V6 No alias type iii chlorophyll a b-binding protein 0.06 Orthogroups_2024-Update
Pp1s214_87V6 No alias type iii chlorophyll a b-binding protein 0.05 Orthogroups_2024-Update
Pp1s429_33V6 No alias type iii chlorophyll a b-binding protein 0.09 Orthogroups_2024-Update
Seita.4G219400.1 No alias component *(LHCa3) of LHC-I complex 0.07 Orthogroups_2024-Update
Sobic.010G189300.1 No alias component *(LHCa3) of LHC-I complex 0.08 Orthogroups_2024-Update
Solyc10g007690 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.1 Orthogroups_2024-Update
Solyc12g011280 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.08 Orthogroups_2024-Update
Sopen10g003600 No alias Chlorophyll A-B binding protein 0.06 Orthogroups_2024-Update
Sopen12g006610 No alias Chlorophyll A-B binding protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004061 arylformamidase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006569 tryptophan catabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009310 amine catabolic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042402 cellular biogenic amine catabolic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042436 indole-containing compound catabolic process IEP Predicted GO
BP GO:0042537 benzene-containing compound metabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046218 indolalkylamine catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070189 kynurenine metabolic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 67 246
No external refs found!