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  5. Glyma.14G014400

Glyma.14G014400


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.14G014400
Cluster HCCA clusters: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
MA_101720g0010 No alias (at3g29090 : 389.0) Encodes an atypical pectin... 0.02 Orthogroups_2024-Update
MA_62865g0010 No alias (at2g36710 : 276.0) Pectin lyase-like superfamily... 0.05 Orthogroups_2024-Update
MA_99816g0010 No alias (at2g36710 : 325.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00000917-RA No alias (at1g05310 : 405.0) Pectin lyase-like superfamily... 0.05 Orthogroups_2024-Update
PSME_00014679-RA No alias (at5g19730 : 298.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Potri.005G012800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G137100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s215_36V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s67_6V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 65 358
No external refs found!