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  5. Glyma.14G032200

Glyma.14G032200


Description : phytochrome interacting factor 4


Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.14G032200
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
A4A49_17964 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At2g20180 No alias Transcription factor PIF1... 0.03 Orthogroups_2024-Update
Brara.H01713.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G062541 No alias phytochrome interacting factor 3 0.04 Orthogroups_2024-Update
GRMZM5G865967 No alias phytochrome interacting factor 4 0.05 Orthogroups_2024-Update
HORVU2Hr1G060680.1 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
HORVU5Hr1G011780.5 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update
HORVU5Hr1G093310.11 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
HORVU5Hr1G102240.2 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os03g43810 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_26114g0010 No alias (at4g36930 : 130.0) Encodes a transcription factor of... 0.03 Orthogroups_2024-Update
Potri.005G139700 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Sobic.001G158900.3 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update
Sobic.002G031000.1 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
Solyc02g093280 No alias LOW QUALITY:bHLH transcription factor 017 0.04 Orthogroups_2024-Update
Sopen06g002870 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 364 410
No external refs found!