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  5. Glyma.14G105900

Glyma.14G105900


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.14G105900
Cluster HCCA clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
A4A49_41488 No alias e3 ubiquitin-protein ligase rduf1 0.03 Orthogroups_2024-Update
At3g60080 No alias At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] 0.03 Orthogroups_2024-Update
Bradi3g34010 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g38870 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.G00930.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
Brara.H00234.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.I05006.1 No alias E3 ubiquitin ligase *(SNIPER) 0.02 Orthogroups_2024-Update
GRMZM2G049346 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G149700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os08g38060 No alias RING finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g04680 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00041932-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00054449-RA No alias (at2g40830 : 144.0) Encodes a putative RING-H2 finger... 0.03 Orthogroups_2024-Update
Potri.012G036700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G065300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G086500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G054700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G001100.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G074600.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc12g008480 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G60360.1) 0.03 Orthogroups_2024-Update
Sopen07g026890 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 232 260
No external refs found!