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  5. Glyma.14G184200

Glyma.14G184200


Description : Pentatricopeptide repeat (PPR-like) superfamily protein


Gene families : OG_42_0010562 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010562_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.14G184200
Cluster HCCA clusters: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G184300 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004363 glutathione synthase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009555 pollen development IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
BP GO:0030490 maturation of SSU-rRNA IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030686 90S preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0048229 gametophyte development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 214 263
IPR002885 Pentatricopeptide_repeat 424 473
IPR002885 Pentatricopeptide_repeat 529 575
IPR002885 Pentatricopeptide_repeat 319 368
IPR002885 Pentatricopeptide_repeat 148 193
IPR002885 Pentatricopeptide_repeat 385 416
IPR002885 Pentatricopeptide_repeat 490 520
IPR002885 Pentatricopeptide_repeat 281 312
No external refs found!