Solyc02g088070

Description : Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc02g088070
Cluster	HCCA clusters: Cluster_251

Target	Alias	Description	ECC score	Gene Family Method
A4A49_12086	No alias	cyclic dof factor 2	0.05	Orthogroups_2024-Update
A4A49_13356	No alias	cyclic dof factor 3	0.04	Orthogroups_2024-Update
A4A49_16781	No alias	dof zinc finger protein dof4.6	0.02	Orthogroups_2024-Update
A4A49_34579	No alias	dof zinc finger protein pbf	0.03	Orthogroups_2024-Update
AC155434.2_FG006	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
At2g37590	No alias	Dof zinc finger protein DOF2.4...	0.04	Orthogroups_2024-Update
Bradi2g09720	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Brara.A01411.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.B03961.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.C04204.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.E00750.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.G01458.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.I00088.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
GRMZM2G042218	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
GRMZM2G089949	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
GRMZM2G146283	No alias	TARGET OF MONOPTEROS 6	0.03	Orthogroups_2024-Update
Glyma.01G049400	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.07G012100	No alias	DOF zinc finger protein 1	0.03	Orthogroups_2024-Update
Glyma.08G228900	No alias	cycling DOF factor 1	0.03	Orthogroups_2024-Update
Glyma.13G230200	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.15G039300	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
Glyma.19G023200	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.19G118000	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.20G216600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G021290.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
LOC_Os01g15900	No alias	expressed protein	0.03	Orthogroups_2024-Update
LOC_Os01g55340	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g48570	No alias	expressed protein	0.02	Orthogroups_2024-Update
LOC_Os10g26620	No alias	dof zinc finger domain containing protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_74014g0010	No alias	(at5g65590 : 133.0) Dof-type zinc finger DNA-binding...	0.03	Orthogroups_2024-Update
MA_97259g0020	No alias	(at5g62430 : 134.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
Mp2g20790.1	No alias	transcription factor (DOF)	0.02	Orthogroups_2024-Update
PSME_00004776-RA	No alias	(at5g60850 : 127.0) Encodes a zinc finger protein.; OBF...	0.02	Orthogroups_2024-Update
PSME_00028077-RA	No alias	(at5g39660 : 211.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
PSME_00040668-RA	No alias	(at5g02460 : 137.0) Dof-type zinc finger DNA-binding...	0.02	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
PSME_00053408-RA	No alias	(at5g39660 : 183.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
PSME_00056872-RA	No alias	(at5g60200 : 116.0) Encodes a Dof-type transcription...	0.03	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Pp1s12_364V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Seita.2G242400.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.5G052700.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.6G192200.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G525000.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Sobic.001G252800.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc02g077950	No alias	Dof zinc finger protein5	0.03	Orthogroups_2024-Update
Solyc05g054510	No alias	Dof zinc finger protein (AHRD V3.3 *** A0A0K9PZW2_ZOSMR)	0.03	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen02g032780	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen03g040210	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen05g003730	No alias	Dof domain, zinc finger	0.06	Orthogroups_2024-Update
Sopen06g031790	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0005244	voltage-gated ion channel activity	IEP	Predicted GO
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Predicted GO
MF	GO:0005253	anion channel activity	IEP	Predicted GO
MF	GO:0005254	chloride channel activity	IEP	Predicted GO
BP	GO:0006821	chloride transport	IEP	Predicted GO
MF	GO:0008308	voltage-gated anion channel activity	IEP	Predicted GO
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Predicted GO
MF	GO:0016597	amino acid binding	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0022832	voltage-gated channel activity	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	108	164

External Links

No external refs found!

Solyc02g088070

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation