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  5. Glyma.14G196700

Glyma.14G196700


Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein


Gene families : OG_42_0002599 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.14G196700
Cluster HCCA clusters: Cluster_438

Target Alias Description ECC score Gene Family Method Actions
At5g20160 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein... 0.03 Orthogroups_2024-Update
Bradi1g68505 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 Orthogroups_2024-Update
Brara.C02711.1 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.04 Orthogroups_2024-Update
Kfl00147_0100 kfl00147_0100_v1.... (at5g20160 : 193.0) Ribosomal protein... 0.06 Orthogroups_2024-Update
LOC_Os03g13800 No alias ribosomal protein L7Ae, putative, expressed 0.02 Orthogroups_2024-Update
Potri.019G087100 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 Orthogroups_2024-Update
Solyc09g011420 No alias Ribosomal protein l7ae (AHRD V3.3 *** A0A0A0LF58_CUCSA) 0.05 Orthogroups_2024-Update
Solyc09g092080 No alias Ribosomal protein l7ae (AHRD V3.3 *** A0A0A0LF58_CUCSA) 0.05 Orthogroups_2024-Update
evm.model.contig_437.8 No alias (at5g20160 : 183.0) Ribosomal protein... 0.02 Orthogroups_2024-Update
evm.model.tig00000600.11 No alias (at5g20160 : 121.0) Ribosomal protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 23 111
No external refs found!