Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Gene families : OG_42_0002599 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002599_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.14G196700 | |
Cluster | HCCA clusters: Cluster_438 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At5g20160 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein... | 0.03 | Orthogroups_2024-Update | |
Bradi1g68505 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.02 | Orthogroups_2024-Update | |
Brara.C02711.1 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.04 | Orthogroups_2024-Update | |
Kfl00147_0100 | kfl00147_0100_v1.... | (at5g20160 : 193.0) Ribosomal protein... | 0.06 | Orthogroups_2024-Update | |
LOC_Os03g13800 | No alias | ribosomal protein L7Ae, putative, expressed | 0.02 | Orthogroups_2024-Update | |
Potri.019G087100 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.03 | Orthogroups_2024-Update | |
Solyc09g011420 | No alias | Ribosomal protein l7ae (AHRD V3.3 *** A0A0A0LF58_CUCSA) | 0.05 | Orthogroups_2024-Update | |
Solyc09g092080 | No alias | Ribosomal protein l7ae (AHRD V3.3 *** A0A0A0LF58_CUCSA) | 0.05 | Orthogroups_2024-Update | |
evm.model.contig_437.8 | No alias | (at5g20160 : 183.0) Ribosomal protein... | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00000600.11 | No alias | (at5g20160 : 121.0) Ribosomal protein... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Predicted GO |
CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Predicted GO |
MF | GO:0001671 | ATPase activator activity | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006260 | DNA replication | IEP | Predicted GO |
BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
BP | GO:0016579 | protein deubiquitination | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
BP | GO:0070646 | protein modification by small protein removal | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 23 | 111 |
No external refs found! |