1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.14G198900

Glyma.14G198900


Description : laccase 3


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.14G198900
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
95740 No alias laccase 17 0.03 Orthogroups_2024-Update
A4A49_13107 No alias laccase-14 0.04 Orthogroups_2024-Update
A4A49_21564 No alias laccase-15 0.04 Orthogroups_2024-Update
Bradi2g23350 No alias laccase 17 0.04 Orthogroups_2024-Update
Bradi2g54680 No alias laccase 17 0.02 Orthogroups_2024-Update
Brara.E01299.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
Brara.J01366.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Brara.J02661.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
GRMZM2G336337 No alias laccase 12 0.04 Orthogroups_2024-Update
Glyma.07G142600 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Glyma.18G193400 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
LOC_Os12g15680 No alias laccase precursor protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00001502-RA No alias (at2g38080 : 615.0) Encodes a protein with similarity to... 0.04 Orthogroups_2024-Update
PSME_00005164-RA No alias (at5g05390 : 649.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00007029-RA No alias (at5g05390 : 758.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00015371-RA No alias (at5g05390 : 674.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00018932-RA No alias (at5g05390 : 800.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00018934-RA No alias (at5g05390 : 747.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00026986-RA No alias (at5g05390 : 621.0) putative laccase, a member of... 0.05 Orthogroups_2024-Update
PSME_00028638-RA No alias (at5g05390 : 656.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00028664-RA No alias (at5g05390 : 686.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00030935-RA No alias (at5g05390 : 627.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00031239-RA No alias (at1g18140 : 634.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00031560-RA No alias (at5g05390 : 678.0) putative laccase, a member of... 0.05 Orthogroups_2024-Update
PSME_00033093-RA No alias (at2g40370 : 637.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00035589-RA No alias (at5g05390 : 699.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00039922-RA No alias (at5g60020 : 722.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00042270-RA No alias (at5g05390 : 793.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00042619-RA No alias (at5g05390 : 581.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00043660-RA No alias (at5g03260 : 768.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Potri.004G156400 No alias laccase 11 0.03 Orthogroups_2024-Update
Potri.015G040700 No alias laccase 1 0.04 Orthogroups_2024-Update
Sobic.004G236100.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Sobic.005G005800.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Sobic.009G162800.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 425 557
IPR001117 Cu-oxidase 165 315
IPR011707 Cu-oxidase_3 40 152
No external refs found!