Sopen10g008890

Description : AP2 domain

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g008890
Cluster	HCCA clusters: Cluster_227

Target	Alias	Description	ECC score	Gene Family Method
A4A49_06467	No alias	ethylene-responsive transcription factor crf4	0.02	Orthogroups_2024-Update
A4A49_17723	No alias	ethylene-responsive transcription factor 1	0.03	Orthogroups_2024-Update
A4A49_20932	No alias	ethylene-responsive transcription factor erf114	0.03	Orthogroups_2024-Update
At4g28140	No alias	Ethylene-responsive transcription factor ERF054...	0.04	Orthogroups_2024-Update
At5g61590	No alias	Ethylene-responsive transcription factor ERF107...	0.03	Orthogroups_2024-Update
Bradi1g23756	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Bradi2g21060	No alias	erf domain protein 9	0.02	Orthogroups_2024-Update
Bradi4g29010	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi5g17610	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.E02487.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Brara.H00147.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Cre16.g649433	No alias	ethylene-responsive element binding protein	0.03	Orthogroups_2024-Update
GRMZM2G055204	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
GRMZM5G846057	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
GRMZM5G852704	No alias	related to AP2 4	0.04	Orthogroups_2024-Update
Glyma.03G162400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.03G162700	No alias	ethylene-responsive element binding factor 15	0.03	Orthogroups_2024-Update
Glyma.08G281900	No alias	DORNROSCHEN-like	0.04	Orthogroups_2024-Update
Glyma.13G081600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.18G018200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G144700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU0Hr1G016370.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G050520.2	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
HORVU7Hr1G037180.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
LOC_Os02g54160	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g08470	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g25260	No alias	AP2 domain containing protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os10g41130	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
PSME_00008358-RA	No alias	(at5g21960 : 122.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.001G067600	No alias	related to AP2 6l	0.02	Orthogroups_2024-Update
Potri.001G079600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.002G065600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.003G179900	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.010G183700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.011G061700	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G115400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.003G297600.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G103100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G124100.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G052600.1	No alias	subgroup ERF-II-DEAR transcription factor	0.02	Orthogroups_2024-Update
Solyc01g009440	No alias	C-repeat binding factor 1 (AHRD V3.3 *** A0A077B5X4_9ROSI)	0.03	Orthogroups_2024-Update
Solyc01g095500	No alias	Sl Cytokinin Response Factor 5	0.03	Orthogroups_2024-Update
Solyc02g077360	No alias	Ethylene Response Factor B.2	0.05	Orthogroups_2024-Update
Solyc02g093130	No alias	AP2/EREBP transcription factor_1	0.03	Orthogroups_2024-Update
Solyc05g051180	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc06g051840	No alias	Solanum lycopersicum Cytokinin Response Factor 6	0.03	Orthogroups_2024-Update
Solyc06g068830	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc08g078190	No alias	ethylene-responsive transcription factor	0.03	Orthogroups_2024-Update
Solyc08g078420	No alias	ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc09g066360	No alias	Ethylene Response Factor C.3	0.03	Orthogroups_2024-Update
Solyc11g012980	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Solyc12g008350	No alias	dehydration responsive element binding protein 2	0.03	Orthogroups_2024-Update
Sopen02g022270	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	58	108

External Links

No external refs found!

Sopen10g008890

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation