Glyma.15G009400

Description : Alba DNA/RNA-binding protein

Gene families : OG_42_0000995 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.15G009400
Cluster	HCCA clusters: Cluster_224

Target	Alias	Description	ECC score	Gene Family Method
Brara.H01960.1	No alias	R-loop reader protein *(ALBA1/2)	0.03	Orthogroups_2024-Update
PSME_00008016-RA	No alias	(at2g34160 : 162.0) Alba DNA/RNA-binding protein;...	0.03	Orthogroups_2024-Update
PSME_00030199-RA	No alias	(at1g29250 : 177.0) Alba DNA/RNA-binding protein;...	0.05	Orthogroups_2024-Update
Sobic.010G184000.1	No alias	R-loop reader protein *(ALBA1/2)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005622	intracellular	IEP	Predicted GO
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0006605	protein targeting	IEP	Predicted GO
CC	GO:0030008	TRAPP complex	IEP	Predicted GO
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Predicted GO
BP	GO:0052646	alditol phosphate metabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002775	DNA/RNA-bd_Alba-like	20	81

External Links

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