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  5. Glyma.15G009800

Glyma.15G009800


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000306_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.15G009800
Cluster HCCA clusters: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
A4A49_14444 No alias putative polygalacturonase 0.03 Orthogroups_2024-Update
Brara.E02564.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.G02021.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
MA_133473g0010 No alias (p35336|pglr_actch : 429.0) Polygalacturonase precursor... 0.02 Orthogroups_2024-Update
PSME_00001783-RA No alias (at1g23460 : 412.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Sobic.001G454800.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 82 406
No external refs found!