Glyma.15G043200


Description : Histone superfamily protein


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.15G043200
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
150847 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
167497 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
233579 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
A4A49_58366 No alias histone h4 0.06 Orthogroups_2024-Update
A4A49_59902 No alias histone h4 0.03 Orthogroups_2024-Update
A4A49_60016 No alias histone h4 0.04 Orthogroups_2024-Update
A4A49_61887 No alias histone h4 0.04 Orthogroups_2024-Update
AC196961.2_FG003 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
AC212565.3_FG001 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
At1g07820 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.06 Orthogroups_2024-Update
At2g28740 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.05 Orthogroups_2024-Update
At3g53730 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.03 Orthogroups_2024-Update
At5g59690 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.03 Orthogroups_2024-Update
Brara.C01885.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.D02284.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.F00466.1 No alias histone *(H4) 0.08 Orthogroups_2024-Update
Brara.F00478.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.G01399.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
Brara.H02899.1 No alias histone *(H4) 0.08 Orthogroups_2024-Update
Brara.I03658.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Cre06.g264600 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g265050 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g265450 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g268000 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre06.g271300 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g274150 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g274300 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.05 Orthogroups_2024-Update
Cre06.g276650 No alias histone H4 0.03 Orthogroups_2024-Update
Cre12.g504600 No alias histone H4 0.02 Orthogroups_2024-Update
Cre12.g504850 No alias histone H4 0.03 Orthogroups_2024-Update
Cre12.g505450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g709100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G084195 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G143780 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G149178 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G088160.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU4Hr1G063260.2 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU5Hr1G087830.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU6Hr1G011510.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Kfl00106_g14 kfl00106_g14_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00240_g19 kfl00240_g19_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Kfl00394_0030 kfl00394_0030_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_10428555g0010 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_97951g0010 No alias (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Mp4g03080.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp4g13440.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp5g22460.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp5g22470.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
PSME_00052564-RA No alias (q71v09|h4_capan : 147.0) Histone H4 (CaH4) - Capsicum... 0.02 Orthogroups_2024-Update
Pp1s2_218V6 No alias histone h4 0.03 Orthogroups_2024-Update
Seita.6G125400.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Seita.7G212600.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc05g054610 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g005420 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc06g005430 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g075830 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g075850 No alias No description available 0.04 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc11g072840 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.05 Orthogroups_2024-Update
Solyc11g072860 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Sopen04g005580 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
Sopen05g033090 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g001390 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g001400 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g032260 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g032280 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g032360 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g032380 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen11g030510 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen11g030530 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
evm.model.contig_2255.1 No alias (at5g59970 : 154.0) Histone superfamily protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!