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  5. Glyma.15G070100

Glyma.15G070100


Description : SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related


Gene families : OG_42_0001683 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001683_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.15G070100
Cluster HCCA clusters: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
At1g61140 No alias SNF2 domain-containing protein / helicase... 0.03 Orthogroups_2024-Update
At3g20010 No alias Helicase-like transcription factor CHR27... 0.03 Orthogroups_2024-Update
Bradi2g51727 No alias SNF2 domain-containing protein / helicase... 0.04 Orthogroups_2024-Update
Glyma.07G192500 No alias SNF2 domain-containing protein / helicase... 0.03 Orthogroups_2024-Update
Glyma.13G183900 No alias SNF2 domain-containing protein / helicase... 0.05 Orthogroups_2024-Update
Mp8g05230.1 No alias chromatin remodeling factor (Ris1) 0.02 Orthogroups_2024-Update
Seita.5G339900.1 No alias chromatin remodeling factor *(Ris1) 0.03 Orthogroups_2024-Update
Sobic.003G316500.1 No alias chromatin remodeling factor *(Ris1) 0.05 Orthogroups_2024-Update
evm.model.tig00021014.10 No alias (at5g22750 : 175.0) DNA repair gene. gamma-radiation... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 1173 1272
IPR000330 SNF2_N 596 972
No external refs found!