Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.15G084700 | |
Cluster | HCCA clusters: Cluster_311 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
114142 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
130453 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | Orthogroups_2024-Update | |
131810 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
134463 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
84339 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
98955 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi1g27320 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi2g53377 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi4g22564 | No alias | mitochondrial editing factor 22 | 0.02 | Orthogroups_2024-Update | |
Bradi4g42160 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.E00818.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.F00580.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Brara.I04699.1 | No alias | RNA editing factor *(MEF21) | 0.03 | Orthogroups_2024-Update | |
Glyma.02G144100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.03G239200 | No alias | mitochondrial editing factor 19 | 0.03 | Orthogroups_2024-Update | |
Glyma.09G086600 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.15G093800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G027440.18 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G085920.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G114390.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
MA_470679g0010 | No alias | (at3g24000 : 433.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00002078-RA | No alias | (at3g12770 : 644.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
PSME_00016248-RA | No alias | (at3g12770 : 631.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
PSME_00018598-RA | No alias | (at1g11290 : 726.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
PSME_00036639-RA | No alias | (at1g11290 : 691.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
Potri.015G047600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Pp1s446_7V6 | No alias | F18A5.40; pentatricopeptide (PPR) repeat-containing... | 0.04 | Orthogroups_2024-Update | |
Pp1s68_207V6 | No alias | ppr gene for putative pentatricopeptide repeat-like protein PPR | 0.02 | Orthogroups_2024-Update | |
Seita.3G224300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.5G381200.1 | No alias | RNA editing factor *(CRR2) | 0.03 | Orthogroups_2024-Update | |
Seita.7G298200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.010G088200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc01g020340 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc01g095160 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
Solyc11g006700 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Sopen01g032860 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen01g054250 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
Sopen03g034780 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen08g010500 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0003883 | CTP synthase activity | IEP | Predicted GO |
MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
BP | GO:0006479 | protein methylation | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008170 | N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
MF | GO:0008276 | protein methyltransferase activity | IEP | Predicted GO |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Predicted GO |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
BP | GO:0016570 | histone modification | IEP | Predicted GO |
BP | GO:0016571 | histone methylation | IEP | Predicted GO |
MF | GO:0016740 | transferase activity | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
BP | GO:0032259 | methylation | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0042054 | histone methyltransferase activity | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 739 | 863 |
IPR002885 | Pentatricopeptide_repeat | 266 | 292 |
IPR002885 | Pentatricopeptide_repeat | 237 | 263 |
IPR002885 | Pentatricopeptide_repeat | 440 | 463 |
IPR002885 | Pentatricopeptide_repeat | 339 | 363 |
IPR002885 | Pentatricopeptide_repeat | 465 | 511 |
IPR002885 | Pentatricopeptide_repeat | 164 | 210 |
IPR002885 | Pentatricopeptide_repeat | 364 | 412 |
IPR002885 | Pentatricopeptide_repeat | 565 | 613 |
No external refs found! |