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  5. Glyma.15G154000

Glyma.15G154000


Description : cullin 1


Gene families : OG_42_0000877 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.15G154000
Cluster HCCA clusters: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
173394 No alias cullin 1 0.02 Orthogroups_2024-Update
Bradi2g35820 No alias cullin 1 0.03 Orthogroups_2024-Update
Bradi2g35830 No alias cullin 1 0.03 Orthogroups_2024-Update
Glyma.09G046500 No alias cullin 1 0.04 Orthogroups_2024-Update
Sobic.009G044800.1 No alias scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes 0.02 Orthogroups_2024-Update
Solyc06g084520 No alias Cul1 0.04 Orthogroups_2024-Update
Sopen06g035900 No alias Cullin family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
MF GO:0031625 ubiquitin protein ligase binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR019559 Cullin_neddylation_domain 674 736
IPR001373 Cullin_N 28 647
No external refs found!