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  5. Glyma.15G174833

Glyma.15G174833


Description : zinc finger WD40 repeat protein 1


Gene families : OG_42_0000910 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000910_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.15G174833
Cluster HCCA clusters: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
Bradi2g05567 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G174500 No alias zinc finger WD40 repeat protein 1 0.02 Orthogroups_2024-Update
Glyma.15G174700 No alias zinc finger WD40 repeat protein 1 0.02 Orthogroups_2024-Update
PSME_00036498-RA No alias (at4g25440 : 186.0) zinc finger WD40 repeat protein 1... 0.02 Orthogroups_2024-Update
PSME_00042630-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 289 323
IPR001680 WD40_repeat 249 284
IPR001680 WD40_repeat 127 162
No external refs found!