Glyma.15G196300

Description : MADS-box transcription factor family protein

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.15G196300
Cluster	HCCA clusters: Cluster_382

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os04g38780	No alias	transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g41960	No alias	OsMADS37 - MADS-box family gene with MIKC* type-box, expressed	0.03	Orthogroups_2024-Update
Potri.012G062300	No alias	AGAMOUS-like 8	0.03	Orthogroups_2024-Update
Potri.015G098400	No alias	AGAMOUS-like 19	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Predicted GO
BP	GO:0006397	mRNA processing	IEP	Predicted GO
BP	GO:0016071	mRNA metabolic process	IEP	Predicted GO
MF	GO:0016289	CoA hydrolase activity	IEP	Predicted GO
MF	GO:0016790	thiolester hydrolase activity	IEP	Predicted GO
MF	GO:0045735	nutrient reservoir activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	11	50

External Links

No external refs found!