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  5. Solyc02g088330

Solyc02g088330


No description available


Gene families : OG_42_0000179 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g088330
Cluster HCCA clusters: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
Bradi1g18450 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Brara.J02325.1 No alias CDKC protein kinase & catalytic component *(CDKC) of... 0.03 Orthogroups_2024-Update
Potri.013G100100 No alias Protein kinase superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G061400 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Sopen11g021440 No alias Protein kinase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!