Solyc02g088340

Description : WRKY transcription factor 3

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc02g088340
Cluster	HCCA clusters: Cluster_187

Target	Alias	Description	ECC score	Gene Family Method
A4A49_27487	No alias	putative wrky transcription factor 23	0.03	Orthogroups_2024-Update
A4A49_33088	No alias	putative wrky transcription factor 72	0.03	Orthogroups_2024-Update
At2g03340	No alias	Putative WRKY DNA-binding protein...	0.04	Orthogroups_2024-Update
At2g40750	No alias	Probable WRKY transcription factor 54...	0.03	Orthogroups_2024-Update
Bradi1g01058	No alias	WRKY DNA-binding protein 35	0.03	Orthogroups_2024-Update
Bradi2g00280	No alias	WRKY DNA-binding protein 26	0.03	Orthogroups_2024-Update
Bradi2g08620	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi4g01950	No alias	WRKY DNA-binding protein 33	0.04	Orthogroups_2024-Update
Bradi4g25717	No alias	WRKY DNA-binding protein 55	0.03	Orthogroups_2024-Update
Brara.C01543.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C01942.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D02346.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.H00940.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.03G224700	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.04G061400	No alias	WRKY DNA-binding protein 40	0.02	Orthogroups_2024-Update
Glyma.07G023300	No alias	WRKY DNA-binding protein 40	0.02	Orthogroups_2024-Update
Glyma.07G057400	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Glyma.09G005700	No alias	WRKY family transcription factor	0.05	Orthogroups_2024-Update
Glyma.11G163300	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Glyma.12G212300	No alias	WRKY DNA-binding protein 69	0.02	Orthogroups_2024-Update
Glyma.18G124700	No alias	WRKY DNA-binding protein 72	0.02	Orthogroups_2024-Update
Glyma.18G183100	No alias	WRKY DNA-binding protein 49	0.03	Orthogroups_2024-Update
HORVU2Hr1G029460.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU3Hr1G033740.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os05g49210	No alias	WRKY43, expressed	0.02	Orthogroups_2024-Update
MA_53351g0010	No alias	(at5g56270 : 326.0) WRKY transcription factor 2; WRKY...	0.02	Orthogroups_2024-Update
Mp7g06550.1	No alias	transcription factor (WRKY)	0.02	Orthogroups_2024-Update
PSME_00010717-RA	No alias	(at4g22070 : 177.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00037996-RA	No alias	(at5g43290 : 110.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
Potri.008G091900	No alias	WRKY DNA-binding protein 4	0.03	Orthogroups_2024-Update
Potri.014G090300	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.014G119800	No alias	WRKY DNA-binding protein 35	0.05	Orthogroups_2024-Update
Seita.3G355500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G319000.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sopen02g033030	No alias	WRKY DNA -binding domain	0.04	Orthogroups_2024-Update
Sopen04g028240	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen08g004130	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0004109	coproporphyrinogen oxidase activity	IEP	Predicted GO
MF	GO:0004252	serine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	Predicted GO
MF	GO:0004559	alpha-mannosidase activity	IEP	Predicted GO
MF	GO:0004871	obsolete signal transducer activity	IEP	Predicted GO
BP	GO:0005996	monosaccharide metabolic process	IEP	Predicted GO
BP	GO:0006013	mannose metabolic process	IEP	Predicted GO
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predicted GO
BP	GO:0006101	citrate metabolic process	IEP	Predicted GO
BP	GO:0006397	mRNA processing	IEP	Predicted GO
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0006873	cellular ion homeostasis	IEP	Predicted GO
BP	GO:0006875	cellular metal ion homeostasis	IEP	Predicted GO
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predicted GO
BP	GO:0007049	cell cycle	IEP	Predicted GO
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predicted GO
MF	GO:0008199	ferric iron binding	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0015923	mannosidase activity	IEP	Predicted GO
BP	GO:0016071	mRNA metabolic process	IEP	Predicted GO
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
BP	GO:0016999	antibiotic metabolic process	IEP	Predicted GO
CC	GO:0017053	transcriptional repressor complex	IEP	Predicted GO
BP	GO:0019318	hexose metabolic process	IEP	Predicted GO
BP	GO:0030003	cellular cation homeostasis	IEP	Predicted GO
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Predicted GO
BP	GO:0048878	chemical homeostasis	IEP	Predicted GO
BP	GO:0050801	ion homeostasis	IEP	Predicted GO
BP	GO:0051186	cofactor metabolic process	IEP	Predicted GO
BP	GO:0051188	cofactor biosynthetic process	IEP	Predicted GO
BP	GO:0055065	metal ion homeostasis	IEP	Predicted GO
BP	GO:0055072	iron ion homeostasis	IEP	Predicted GO
BP	GO:0055076	transition metal ion homeostasis	IEP	Predicted GO
BP	GO:0055080	cation homeostasis	IEP	Predicted GO
BP	GO:0055082	cellular chemical homeostasis	IEP	Predicted GO
CC	GO:0070176	DRM complex	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO
CC	GO:0090568	nuclear transcriptional repressor complex	IEP	Predicted GO
CC	GO:0090571	RNA polymerase II transcription repressor complex	IEP	Predicted GO
BP	GO:0098771	inorganic ion homeostasis	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	116	400

External Links

No external refs found!

Solyc02g088340

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation