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  5. Glyma.15G269400

Glyma.15G269400


Description : glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein


Gene families : OG_42_0000512 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000512_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.15G269400

Target Alias Description ECC score Gene Family Method Actions
At1g78400 No alias Pectin lyase-like superfamily protein... 0.05 Orthogroups_2024-Update
Bradi1g40990 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g13740 No alias glycoside hydrolase family 28 protein /... 0.02 Orthogroups_2024-Update
Brara.G00223.1 No alias pectin lyase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Potri.007G035800 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 77 323
No external refs found!