Description : Pectin lyase-like superfamily protein
Gene families : OG_42_0000306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000306_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.15G275400 | |
Cluster | HCCA clusters: Cluster_539 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_04568 | No alias | polygalacturonase-2 | 0.03 | Orthogroups_2024-Update | |
A4A49_21681 | No alias | putative polygalacturonase | 0.04 | Orthogroups_2024-Update | |
Glyma.09G224800 | No alias | Pectin lyase-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.11G162574 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.12G012200 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.17G209800 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.U005701 | No alias | Pectin lyase-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU1Hr1G079140.6 | No alias | EC_3.2 glycosylase | 0.03 | Orthogroups_2024-Update | |
MA_285723g0010 | No alias | (at1g70500 : 261.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
PSME_00023336-RA | No alias | (at1g80170 : 252.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
PSME_00025694-RA | No alias | (at1g80170 : 422.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
Seita.2G350500.1 | No alias | EC_3.2 glycosylase | 0.03 | Orthogroups_2024-Update | |
Seita.5G383600.1 | No alias | EC_3.2 glycosylase | 0.03 | Orthogroups_2024-Update | |
Sobic.001G045400.1 | No alias | polygalacturonase *(QRT2) & EC_3.2 glycosylase | 0.02 | Orthogroups_2024-Update | |
Solyc12g009420 | No alias | Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G57510.1) | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005215 | transporter activity | IEP | Predicted GO |
BP | GO:0006810 | transport | IEP | Predicted GO |
BP | GO:0006811 | ion transport | IEP | Predicted GO |
BP | GO:0006812 | cation transport | IEP | Predicted GO |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015297 | antiporter activity | IEP | Predicted GO |
MF | GO:0015298 | solute:cation antiporter activity | IEP | Predicted GO |
MF | GO:0015299 | solute:proton antiporter activity | IEP | Predicted GO |
BP | GO:0015696 | ammonium transport | IEP | Predicted GO |
MF | GO:0022804 | active transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
CC | GO:0031012 | extracellular matrix | IEP | Predicted GO |
CC | GO:0044421 | extracellular region part | IEP | Predicted GO |
BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 101 | 426 |
No external refs found! |