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  5. Glyma.16G007400

Glyma.16G007400


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G007400
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Bradi4g30617 No alias ARIA-interacting double AP2 domain protein 0.06 Orthogroups_2024-Update
Brara.B01213.1 No alias AP2-type transcription factor *(WRI/AIL) 0.04 Orthogroups_2024-Update
GRMZM2G021573 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.04G047900 No alias Integrase-type DNA-binding superfamily protein 0.06 Orthogroups_2024-Update
Glyma.05G091200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G038200 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G297000 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G199800 No alias AINTEGUMENTA-like 6 0.05 Orthogroups_2024-Update
Glyma.15G044400 No alias related to AP2.7 0.02 Orthogroups_2024-Update
HORVU2Hr1G113880.23 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
LOC_Os01g67410 No alias AP2/EREBP transcription factor BABY BOOM, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g55970 No alias AP2-like ethylene-responsive transcription factor... 0.03 Orthogroups_2024-Update
PSME_00036178-RA No alias (at4g18520 : 129.0) Pentatricopeptide repeat (PPR)... 0.06 Orthogroups_2024-Update
Potri.001G018400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G011900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G102200 No alias ARIA-interacting double AP2 domain protein 0.03 Orthogroups_2024-Update
Pp1s17_137V6 No alias ap2 domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.7G308300.1 No alias AP2-type transcription factor *(WRI/AIL) 0.04 Orthogroups_2024-Update
Sobic.009G212500.1 No alias AP2-type transcription factor *(WRI/AIL) &... 0.05 Orthogroups_2024-Update
Solyc03g117720 No alias AP2-like ethylene-responsive transcription factor family... 0.03 Orthogroups_2024-Update
Solyc11g010710 No alias AP2-like ethylene-responsive transcription factor (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 346 397
IPR001471 AP2/ERF_dom 244 303
No external refs found!