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  5. Glyma.16G014600

Glyma.16G014600


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G014600
Cluster HCCA clusters: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
At2g35910 No alias RING-H2 finger protein ATL70... 0.03 Orthogroups_2024-Update
Brara.E03386.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G00123.1 No alias regulatory E3 ubiquitin ligase targeted to IRT1 *(IDF1) 0.03 Orthogroups_2024-Update
Glyma.17G028400 No alias TOXICOS EN LEVADURA 2 0.04 Orthogroups_2024-Update
HORVU2Hr1G104860.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU3Hr1G028260.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
MA_25345g0010 No alias (at1g49230 : 107.0) RING/U-box superfamily protein;... 0.05 Orthogroups_2024-Update
MA_69343g0010 No alias (at1g49230 : 137.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Pp1s460_19V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Solyc03g112340 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G05200.1) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 107 150
No external refs found!