Description : RNA-binding (RRM/RBD/RNP motifs) family protein
Gene families : OG_42_0000483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000483_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.16G019500 | |
Cluster | HCCA clusters: Cluster_247 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
100311 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | Orthogroups_2024-Update | |
Bradi3g53240 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.1 | Orthogroups_2024-Update | |
Brara.E01887.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Glyma.04G014300 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.07 | Orthogroups_2024-Update | |
Glyma.14G174600 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.05 | Orthogroups_2024-Update | |
LOC_Os03g14190 | No alias | RNA recognition motif containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os06g11730 | No alias | RNA recognition motif containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
Pp1s126_15V6 | No alias | F9H16.14; RNA recognition motif (RRM)-containing protein... | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
BP | GO:0007165 | signal transduction | IEP | Predicted GO |
MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0043531 | ADP binding | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
BP | GO:0065007 | biological regulation | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 26 | 83 |
No external refs found! |