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  5. Glyma.16G024800

Glyma.16G024800


Description : RNA-binding CRS1 / YhbY (CRM) domain-containing protein


Gene families : OG_42_0001286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001286_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G024800
Cluster HCCA clusters: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G075100 No alias RNA-binding CRS1 / YhbY (CRM) domain-containing protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G020050.20 No alias mCSF mitochondrial RNA splicing factor 0.03 Orthogroups_2024-Update
PSME_00011061-RA No alias (at2g20020 : 87.4) Promotes the splicing of chloroplast... 0.03 Orthogroups_2024-Update
Seita.5G154500.1 No alias component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.02 Orthogroups_2024-Update
Solyc07g064490 No alias CRS2-associated factor 1 (AHRD V3.3 *** A0A072THI3_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 280 362
IPR001890 RNA-binding_CRM 159 244
No external refs found!