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  5. Glyma.16G025400

Glyma.16G025400


Description : cyclic nucleotide-gated channel 13


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G025400
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
A4A49_15343 No alias putative cyclic nucleotide-gated ion channel 17 0.01 Orthogroups_2024-Update
A4A49_17367 No alias cyclic nucleotide-gated ion channel 1 0.02 Orthogroups_2024-Update
A4A49_63668 No alias cyclic nucleotide-gated ion channel 1 0.01 Orthogroups_2024-Update
At1g15990 No alias Putative cyclic nucleotide-gated ion channel 7... 0.01 Orthogroups_2024-Update
At2g24610 No alias cyclic nucleotide-gated channel 14 [Source:TAIR;Acc:AT2G24610] 0.01 Orthogroups_2024-Update
At2g46440 No alias Cyclic nucleotide-gated ion channel 11... 0.01 Orthogroups_2024-Update
At3g17700 No alias Probable cyclic nucleotide-gated ion channel 20,... 0.01 Orthogroups_2024-Update
At4g01010 No alias Putative cyclic nucleotide-gated ion channel 13... 0.03 Orthogroups_2024-Update
Bradi2g57697 No alias cyclic nucleotide-gated channel 18 0.02 Orthogroups_2024-Update
Bradi5g23700 No alias cyclic nucleotide gated channel 5 0.03 Orthogroups_2024-Update
Brara.A02980.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.B01472.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.01 Orthogroups_2024-Update
Brara.D01484.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.E02422.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.K00815.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
GRMZM2G023534 No alias cyclic nucleotide-gated channel 14 0.07 Orthogroups_2024-Update
GRMZM2G077828 No alias cyclic nucleotide gated channel 7 0.01 Orthogroups_2024-Update
Glyma.06G184000 No alias cyclic nucleotide-gated channel 16 0.01 Orthogroups_2024-Update
Glyma.07G025000 No alias cyclic nucleotide gated channel 19 0.03 Orthogroups_2024-Update
Glyma.08G219300 No alias cyclic nucleotide gated channel 8 0.02 Orthogroups_2024-Update
Glyma.08G241600 No alias Cyclic nucleotide-regulated ion channel family protein 0.02 Orthogroups_2024-Update
Glyma.16G218000 No alias cyclic nucleotide-binding transporter 1 0.01 Orthogroups_2024-Update
Glyma.16G218300 No alias cyclic nucleotide-binding transporter 1 0.06 Orthogroups_2024-Update
Glyma.19G255300 No alias cyclic nucleotide gated channel 1 0.01 Orthogroups_2024-Update
Glyma.19G255500 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
HORVU5Hr1G065950.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
HORVU5Hr1G088830.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
LOC_Os09g38580 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os12g06570 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.02 Orthogroups_2024-Update
MA_167620g0010 No alias (at5g15410 : 804.0) 'defense, no death' gene (DND1)... 0.02 Orthogroups_2024-Update
PSME_00010744-RA No alias (at3g17700 : 191.0) cyclic nucleotide-binding... 0.02 Orthogroups_2024-Update
PSME_00046136-RA No alias (at1g15990 : 435.0) member of Cyclic nucleotide gated... 0.01 Orthogroups_2024-Update
Potri.001G407800 No alias cyclic nucleotide-gated cation channel 4 0.01 Orthogroups_2024-Update
Potri.002G170000 No alias cyclic nucleotide gated channel 10 0.02 Orthogroups_2024-Update
Potri.006G271050 No alias cyclic nucleotide-gated channel 14 0.02 Orthogroups_2024-Update
Potri.014G097900 No alias cyclic nucleotide gated channel 1 0.01 Orthogroups_2024-Update
Potri.015G019100 No alias cyclic nucleotide gated channel 1 0.01 Orthogroups_2024-Update
Potri.015G033900 No alias cyclic nucleotide-binding transporter 1 0.01 Orthogroups_2024-Update
Potri.017G089800 No alias Cyclic nucleotide-regulated ion channel family protein 0.02 Orthogroups_2024-Update
Seita.4G168400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.01 Orthogroups_2024-Update
Sobic.004G113300.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Sobic.004G325400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc05g050350 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.03 Orthogroups_2024-Update
Sopen12g004880 No alias Ion transport protein 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 484 573
IPR005821 Ion_trans_dom 68 391
No external refs found!