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  5. Glyma.16G034100

Glyma.16G034100


Description : brassinosteroid-responsive RING-H2


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G034100
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
A4A49_03376 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi1g51897 No alias brassinosteroid-responsive RING-H2 0.02 Orthogroups_2024-Update
Brara.H02916.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.01G093800 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.05G182000 No alias RING-H2 finger A2A 0.04 Orthogroups_2024-Update
Glyma.18G235600 No alias brassinosteroid-responsive RING-H2 0.04 Orthogroups_2024-Update
HORVU4Hr1G051840.1 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os07g48680 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_4795437g0010 No alias (at3g43430 : 102.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
Potri.007G086100 No alias receptor homology region transmembrane domain ring H2... 0.04 Orthogroups_2024-Update
Potri.010G047100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G133700 No alias brassinosteroid-responsive RING-H2 0.03 Orthogroups_2024-Update
Potri.014G087700 No alias brassinosteroid-responsive RING-H2 0.03 Orthogroups_2024-Update
Seita.1G273100.1 No alias E3 ubiquitin ligase *(BRH) 0.03 Orthogroups_2024-Update
Sobic.004G281400.1 No alias E3 ubiquitin ligase *(BRH) 0.03 Orthogroups_2024-Update
Solyc04g054370 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT5G41400.1) 0.03 Orthogroups_2024-Update
Sopen04g024160 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 94 137
No external refs found!