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  5. Glyma.16G043600

Glyma.16G043600


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0009336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G043600
Cluster HCCA clusters: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
Glyma.19G108600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
LOC_Os01g60010 No alias PPR repeat domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.5G358800.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 474 502
IPR002885 Pentatricopeptide_repeat 195 219
IPR002885 Pentatricopeptide_repeat 509 538
IPR002885 Pentatricopeptide_repeat 403 448
IPR002885 Pentatricopeptide_repeat 334 382
No external refs found!