Glyma.16G079600

Description : cytokinin response factor 4

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.16G079600
Cluster	HCCA clusters: Cluster_126

Target	Alias	Description	ECC score	Gene Family Method
At1g12630	No alias	Ethylene-responsive transcription factor ERF027...	0.02	Orthogroups_2024-Update
Brara.A00380.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Brara.I02951.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G060876	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G080516	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.05G015900	No alias	related to AP2 11	0.05	Orthogroups_2024-Update
Glyma.10G016500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.17G216100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os01g54890	No alias	ethylene-responsive transcription factor 2, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g52090	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_71018g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00005183-RA	No alias	(at5g47220 : 92.8) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
Seita.2G276200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G084600.1	No alias	cutin and suberin biosynthesis transcription factor...	0.04	Orthogroups_2024-Update
Sobic.004G171300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.006G058732.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G240500.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Solyc01g108240	No alias	Ethylene Response Factor D.3	0.04	Orthogroups_2024-Update
Solyc11g012980	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen03g033540	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004594	pantothenate kinase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	108	157

External Links

No external refs found!

Glyma.16G079600

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation