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  5. Glyma.16G083100

Glyma.16G083100


Description : Actin binding Calponin homology (CH) domain-containing protein


Gene families : OG_42_0001020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G083100
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Brara.I00381.1 No alias fimbrin actin-crosslinking factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G045950.9 No alias fimbrin actin-crosslinking factor 0.02 Orthogroups_2024-Update
MA_10430678g0010 No alias (at5g35700 : 189.0) fimbrin-like protein 2 (FIM2);... 0.06 Orthogroups_2024-Update
Pp1s271_36V6 No alias F10M23.40; fimbrin-like protein (FIM1) [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Solyc06g083070 No alias Fimbrin, putative (AHRD V3.3 *** B9SMN8_RICCO) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001715 CH-domain 151 237
IPR001715 CH-domain 396 499
IPR001715 CH-domain 269 370
IPR001715 CH-domain 518 622
No external refs found!