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  5. Glyma.16G112200

Glyma.16G112200


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G112200
Cluster HCCA clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
59303 No alias RING/U-box superfamily protein 0.08 Orthogroups_2024-Update
A4A49_30512 No alias ring-h2 finger protein atl54 0.02 Orthogroups_2024-Update
Brara.E00038.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E02957.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.H00317.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.I02510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Glyma.04G215600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G143350 No alias TOXICOS EN LEVADURA 2 0.01 Orthogroups_2024-Update
Glyma.14G058000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os01g64620 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
Potri.001G309600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G074900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Seita.7G218600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc06g049030 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FT40_THECC) 0.04 Orthogroups_2024-Update
Sopen06g015390 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 142
No external refs found!