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  5. Glyma.16G119200

Glyma.16G119200


Description : basic chitinase


Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G119200
Cluster HCCA clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
446851 No alias basic chitinase 0.03 Orthogroups_2024-Update
Bradi2g11140 No alias Chitinase family protein 0.03 Orthogroups_2024-Update
Bradi2g47210 No alias basic chitinase 0.03 Orthogroups_2024-Update
Bradi3g32340 No alias basic chitinase 0.02 Orthogroups_2024-Update
GRMZM2G064360 No alias Chitinase family protein 0.04 Orthogroups_2024-Update
GRMZM2G103668 No alias basic chitinase 0.02 Orthogroups_2024-Update
LOC_Os03g04060 No alias CHIT16 - Chitinase family protein precursor, expressed 0.03 Orthogroups_2024-Update
PSME_00012569-RA No alias (p17514|chiq_tobac : 260.0) Acidic endochitinase Q... 0.02 Orthogroups_2024-Update
PSME_00050349-RA No alias (p52403|chi1_soltu : 337.0) Endochitinase 1 precursor... 0.03 Orthogroups_2024-Update
Pp1s134_173V6 No alias chitinase 0.02 Orthogroups_2024-Update
Seita.4G286000.1 No alias basic chitinase *(CHIB) 0.03 Orthogroups_2024-Update
Sopen02g027750 No alias Chitinase class I 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan predictions
BP GO:0006032 chitin catabolic process IEA InterProScan predictions
MF GO:0008061 chitin binding IEA InterProScan predictions
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 25 62
IPR000726 Glyco_hydro_19_cat 82 311
No external refs found!