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  5. Glyma.16G141100

Glyma.16G141100


Description : C2H2-like zinc finger protein


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G141100
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
A4A49_07606 No alias protein shoot gravitropism 5 0.04 Orthogroups_2024-Update
Bradi1g18370 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Brara.A03232.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Brara.H00083.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Glyma.07G107500 No alias indeterminate(ID)-domain 14 0.04 Orthogroups_2024-Update
Glyma.12G070300 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.17G228000 No alias indeterminate(ID)-domain 2 0.03 Orthogroups_2024-Update
Glyma.20G184000 No alias indeterminate(ID)-domain 4 0.05 Orthogroups_2024-Update
HORVU2Hr1G036710.3 No alias C2H2 subclass IDD transcription factor 0.06 Orthogroups_2024-Update
MA_12028g0010 No alias (at2g01940 : 315.0) May be involved in an early event in... 0.03 Orthogroups_2024-Update
Potri.010G101200 No alias C2H2-like zinc finger protein 0.05 Orthogroups_2024-Update
Potri.013G019200 No alias indeterminate(ID)-domain 2 0.02 Orthogroups_2024-Update
Potri.015G033100 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Pp1s43_228V6 No alias nucleic acid binding 0.03 Orthogroups_2024-Update
Seita.1G067600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G247000.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G469100.2 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Sopen02g030250 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update
Sopen04g003650 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 60 82
No external refs found!