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  5. Glyma.16G178600

Glyma.16G178600


Description : Protein of unknown function (DUF604)


Gene families : OG_42_0000161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000161_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G178600
Cluster HCCA clusters: Cluster_533

Target Alias Description ECC score Gene Family Method Actions
At4g23490 No alias At4g23490/F16G20_190 [Source:UniProtKB/TrEMBL;Acc:Q8H0S2] 0.03 Orthogroups_2024-Update
Brara.A02005.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.A03409.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E02937.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G061202 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
HORVU3Hr1G093770.3 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00001834-RA No alias (at1g33250 : 408.0) Protein of unknown function... 0.04 Orthogroups_2024-Update
PSME_00029840-RA No alias (at1g07850 : 422.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
Potri.010G199900 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
Potri.016G101200 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
Sobic.001G424132.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc05g046110 No alias transferring glycosyl group transferase (DUF604) (AHRD... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006740 DUF604 234 488
No external refs found!