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  5. Glyma.16G179400

Glyma.16G179400


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0008549 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008549_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G179400
Cluster HCCA clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
MA_285386g0010 No alias (at2g13600 : 457.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
Sobic.003G350000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 306 349
IPR002885 Pentatricopeptide_repeat 173 206
IPR002885 Pentatricopeptide_repeat 74 118
IPR002885 Pentatricopeptide_repeat 207 237
No external refs found!