Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000374 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000374_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.16G199700 | |
Cluster | HCCA clusters: Cluster_448 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g62590 | No alias | Pentatricopeptide repeat-containing protein At1g62590... | 0.04 | Orthogroups_2024-Update | |
Brara.I05097.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.K01813.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000123 | histone acetyltransferase complex | IEP | Predicted GO |
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
MF | GO:0017016 | Ras GTPase binding | IEP | Predicted GO |
MF | GO:0017048 | Rho GTPase binding | IEP | Predicted GO |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Predicted GO |
CC | GO:0031248 | protein acetyltransferase complex | IEP | Predicted GO |
MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
CC | GO:0070461 | SAGA-type complex | IEP | Predicted GO |
CC | GO:1902493 | acetyltransferase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 171 | 198 |
IPR002885 | Pentatricopeptide_repeat | 310 | 340 |
IPR002885 | Pentatricopeptide_repeat | 273 | 302 |
IPR002885 | Pentatricopeptide_repeat | 207 | 255 |
IPR002885 | Pentatricopeptide_repeat | 488 | 534 |
IPR002885 | Pentatricopeptide_repeat | 349 | 396 |
IPR002885 | Pentatricopeptide_repeat | 103 | 150 |
IPR002885 | Pentatricopeptide_repeat | 418 | 466 |
No external refs found! |