Description : Ribosomal protein S3 family protein
Gene families : OG_42_0001926 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001926_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.16G207300 | |
Cluster | HCCA clusters: Cluster_300 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_00336 | No alias | 40s ribosomal protein s3-3 | 0.04 | Orthogroups_2024-Update | |
At2g31610 | No alias | 40S ribosomal protein S3-1... | 0.03 | Orthogroups_2024-Update | |
Brara.C01612.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Brara.C01619.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
Brara.D01897.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Brara.D01899.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Cre02.g102250 | No alias | Ribosomal protein S3 family protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G074300 | No alias | Ribosomal protein S3 family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.10G133100 | No alias | Ribosomal protein S3 family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.10G133800 | No alias | Ribosomal protein S3 family protein | 0.03 | Orthogroups_2024-Update | |
MA_120861g0010 | No alias | (at5g35530 : 372.0) Ribosomal protein S3 family protein;... | 0.03 | Orthogroups_2024-Update | |
Mp1g16730.1 | No alias | component RPS3 of SSU proteome | 0.04 | Orthogroups_2024-Update | |
PSME_00040312-RA | No alias | (at5g35530 : 390.0) Ribosomal protein S3 family protein;... | 0.03 | Orthogroups_2024-Update | |
Pp1s127_74V6 | No alias | 40s ribosomal protein | 0.05 | Orthogroups_2024-Update | |
Pp1s136_175V6 | No alias | 40s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s29_222V6 | No alias | 40s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s31_178V6 | No alias | 40s ribosomal protein | 0.02 | Orthogroups_2024-Update | |
Pp1s41_146V6 | No alias | 40s ribosomal protein | 0.05 | Orthogroups_2024-Update | |
Pp1s454_3V6 | No alias | 40s ribosomal protein | 0.03 | Orthogroups_2024-Update | |
Seita.2G385700.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Seita.6G050300.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.11 | Orthogroups_2024-Update | |
Sobic.002G371100.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Sobic.007G053300.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.08 | Orthogroups_2024-Update | |
Solyc07g041310 | No alias | Ribosomal protein S3 family protein (AHRD V3.3 *** AT5G35530.1) | 0.06 | Orthogroups_2024-Update | |
Solyc08g061850 | No alias | Ribosomal protein S3 family protein (AHRD V3.3 *** AT5G35530.1) | 0.05 | Orthogroups_2024-Update | |
Solyc08g061960 | No alias | Ribosomal protein S3 family protein (AHRD V3.3 *** AT5G35530.1) | 0.04 | Orthogroups_2024-Update | |
Sopen07g020630 | No alias | Ribosomal protein S3, C-terminal domain | 0.09 | Orthogroups_2024-Update | |
Sopen08g017410 | No alias | Ribosomal protein S3, C-terminal domain | 0.06 | Orthogroups_2024-Update | |
Sopen08g017480 | No alias | Ribosomal protein S3, C-terminal domain | 0.07 | Orthogroups_2024-Update | |
evm.model.contig_2149.7 | No alias | (at5g35530 : 302.0) Ribosomal protein S3 family protein;... | 0.07 | Orthogroups_2024-Update | |
evm.model.tig00021462.41 | No alias | (at2g31610 : 358.0) Ribosomal protein S3 family protein;... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | InterProScan predictions |
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003774 | motor activity | IEP | Predicted GO |
MF | GO:0003777 | microtubule motor activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Predicted GO |
MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Predicted GO |
BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
BP | GO:0005985 | sucrose metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006487 | protein N-linked glycosylation | IEP | Predicted GO |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Predicted GO |
BP | GO:0007017 | microtubule-based process | IEP | Predicted GO |
BP | GO:0007018 | microtubule-based movement | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008026 | ATP-dependent helicase activity | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Predicted GO |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
MF | GO:0016157 | sucrose synthase activity | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0017048 | Rho GTPase binding | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
BP | GO:0018196 | peptidyl-asparagine modification | IEP | Predicted GO |
BP | GO:0018279 | protein N-linked glycosylation via asparagine | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
MF | GO:0042393 | histone binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predicted GO |
MF | GO:0046527 | glucosyltransferase activity | IEP | Predicted GO |
MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
No external refs found! |