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  5. Glyma.16G217800

Glyma.16G217800


Description : homeodomain GLABROUS 11


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G217800
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
A4A49_31875 No alias homeobox-leucine zipper protein meristem l1 0.02 Orthogroups_2024-Update
Brara.H00913.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G077690.2 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
MA_10433688g0010 No alias (at4g21750 : 540.0) Encodes a homeobox protein similar... 0.03 Orthogroups_2024-Update
Potri.002G154700 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.02 Orthogroups_2024-Update
Sobic.004G313900.1 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 225 448
IPR001356 Homeobox_dom 25 80
No external refs found!