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  5. Glyma.17G045300

Glyma.17G045300


Description : RING/FYVE/PHD-type zinc finger family protein


Gene families : OG_42_0001621 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001621_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G045300
Cluster HCCA clusters: Cluster_415

Target Alias Description ECC score Gene Family Method Actions
447803 No alias RING/FYVE/PHD-type zinc finger family protein 0.02 Orthogroups_2024-Update
Potri.018G064200 No alias RING/FYVE/PHD-type zinc finger family protein 0.04 Orthogroups_2024-Update
Seita.2G102500.1 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I complex 0.03 Orthogroups_2024-Update
Sobic.004G102400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen02g020960 No alias Family of unknown function (DUF500) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007461 Ysc84_actin-binding 352 477
IPR000306 Znf_FYVE 170 235
No external refs found!