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  5. Glyma.17G051200

Glyma.17G051200


Description : BREVIS RADIX-like 4


Gene families : OG_42_0000856 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000856_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G051200
Cluster HCCA clusters: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
A4A49_38320 No alias protein brevis radix-like 4 0.03 Orthogroups_2024-Update
LOC_Os02g47230 No alias Disease resistance/zinc finger/chromosome... 0.03 Orthogroups_2024-Update
LOC_Os03g63650 No alias brevis radix, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.007G151500.1 No alias plasma membrane-to-nucleus signalling factor *(BRX) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR027988 BRX_N 20 52
IPR013591 Brevis_radix_dom 310 365
IPR013591 Brevis_radix_dom 132 186
No external refs found!