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  5. Glyma.17G054700

Glyma.17G054700


Description : CwfJ-like family protein / zinc finger (CCCH-type) family protein


Gene families : OG_42_0005157 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G054700
Cluster HCCA clusters: Cluster_395

Target Alias Description ECC score Gene Family Method Actions
Sopen12g003800 No alias Protein similar to CwfJ C-terminus 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 312 333
IPR006768 Cwf19-like_C_dom-1 382 493
No external refs found!