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  5. Glyma.17G056300

Glyma.17G056300


Description : homeobox from Arabidopsis thaliana


Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G056300
Cluster HCCA clusters: Cluster_359

Target Alias Description ECC score Gene Family Method Actions
At5g06710 No alias Homeobox-leucine zipper protein HAT14... 0.04 Orthogroups_2024-Update
Bradi3g03970 No alias homeobox from Arabidopsis thaliana 0.02 Orthogroups_2024-Update
Brara.A01857.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G047715 No alias homeobox from Arabidopsis thaliana 0.03 Orthogroups_2024-Update
Glyma.05G062700 No alias homeobox protein 2 0.03 Orthogroups_2024-Update
Glyma.14G091000 No alias homeobox from Arabidopsis thaliana 0.04 Orthogroups_2024-Update
LOC_Os03g12860 No alias homeobox associated leucine zipper, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00038042-RA No alias (at5g06710 : 121.0) Homeobox-leucine zipper protein.;... 0.03 Orthogroups_2024-Update
Potri.006G193700 No alias homeobox from Arabidopsis thaliana 0.04 Orthogroups_2024-Update
Potri.014G045100 No alias homeobox-leucine zipper protein 3 0.03 Orthogroups_2024-Update
Seita.9G481800.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Sopen02g036500 No alias Homeobox associated leucine zipper 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 92 146
No external refs found!