1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.17G060832

Glyma.17G060832


Description : pumilio 6


Gene families : OG_42_0003031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G060832
Cluster HCCA clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g32210 No alias pumilio-family RNA binding repeat containing protein, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 1 24
IPR001313 Pumilio_RNA-bd_rpt 36 59
IPR001313 Pumilio_RNA-bd_rpt 71 98
No external refs found!