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  5. Glyma.17G064400

Glyma.17G064400


Description : 4-coumarate:CoA ligase 2


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G064400
Cluster HCCA clusters: Cluster_474

Target Alias Description ECC score Gene Family Method Actions
Bradi1g31320 No alias 4-coumarate:CoA ligase 3 0.03 Orthogroups_2024-Update
Bradi3g52350 No alias 4-coumarate:CoA ligase 3 0.04 Orthogroups_2024-Update
Brara.H02326.1 No alias OPC-8 0.03 Orthogroups_2024-Update
HORVU4Hr1G072150.3 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00006219-RA No alias (at4g05160 : 449.0) Encodes a peroxisomal protein... 0.03 Orthogroups_2024-Update
PSME_00010613-RA No alias (at1g20510 : 572.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00022572-RA No alias (at1g20510 : 236.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.04 Orthogroups_2024-Update
PSME_00042414-RA No alias (at1g20510 : 636.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00043405-RA No alias (at1g20510 : 552.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
Sobic.010G214900.1 No alias p-coumarate 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 456 531
IPR000873 AMP-dep_Synth/Lig 38 447
No external refs found!