1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.17G119400

Glyma.17G119400


Description : Stabilizer of iron transporter SufD / Polynucleotidyl transferase


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G119400
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Brara.J01515.1 No alias siRNA-integrating factor *(AGO) 0.03 Orthogroups_2024-Update
Glyma.20G022900 No alias Argonaute family protein 0.05 Orthogroups_2024-Update
Seita.2G066500.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR003165 Piwi 547 866
IPR014811 ArgoL1 206 255
IPR032472 ArgoL2 400 444
IPR032473 Argonaute_Mid_dom 455 532
IPR003100 PAZ_dom 262 388
IPR032474 Argonaute_N 63 196
No external refs found!