1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.17G126000

Glyma.17G126000


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G126000
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At5g50120 No alias Similarity to GTP-binding regulatory protein and... 0.03 Orthogroups_2024-Update
Brara.K00352.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g52870 No alias WD-40 repeat family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_142012g0010 No alias (at1g24130 : 357.0) Transducin/WD40 repeat-like... 0.03 Orthogroups_2024-Update
Solyc01g109120 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc04g079700 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 254 285
IPR001680 WD40_repeat 297 341
IPR001680 WD40_repeat 162 197
No external refs found!